Showing posts with label aroma.affymetrix. Show all posts
Showing posts with label aroma.affymetrix. Show all posts

Wednesday, March 03, 2010

Setting up aroma.affymetrix for analysis

Setting up aroma.affymetrix for analysis two directories : rawData and annotationData
from where aroma is launched

rawData/cancer_name/HuGene-1_0-st-v1/*.CEL
annotationData/chipTypes/HuGene-1_0-st-v1/*.cdf
annotationData/chipTypes/HuGene-1_0-st-v1/NetAffx/*.csv